Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCGACTCGCAGCAGCAGG
((((.(((((((((((..(((&)))))))).)))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_023011
GeneSymbolUPF3A
Binding site139,160
Score0.846
Seed0
Au0.353
Energy-23.4
Binding len21
Me-8.057
Phylopstem0.6877044166666665
Phylopflank0.08654792499999997
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure