Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTTCCCGGCTCCTGGCTGCAGCCATGGAGTTGCAGA
((((((((.(((((((((((.&.)))...)))))))..).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_023015
GeneSymbolINTS3
Binding site558,598
Score0.923
Seed1
Au0.368
Energy-22.1
Binding len27
Me-4.994
Phylopstem0.6107517750000001
Phylopflank1.10346624
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure