Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTATAATTTGCCAGGG
.(((((((.....(((((((((&)))))))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_023016
GeneSymbolSOWAHC
Binding site4034,4054
Score1.0
Seed1
Au0.662
Energy-20.1
Binding len20
Me-13.553
Phylopstem1.0050540000000001
Phylopflank0.3063970195
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure