Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGACGAGCGCTGGAAGGCTGCC
..(((((((((.((((..((.&))..)))).))).....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_023035
GeneSymbolCACNA1A
Binding site2661,2685
Score0.846
Seed1
Au0.397
Energy-21.2
Binding len24
Me-8.304
Phylopstem4.507053728571429
Phylopflank3.911479119124999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure