Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATCGTCACCAACCCCAGCGGCAC
.(((.((((.(((((((((((&)))))).......))))).)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_023035
GeneSymbolCACNA1A
Binding site3694,3722
Score0.923
Seed0
Au0.426
Energy-21.2
Binding len28
Me-9.155
Phylopstem5.676850866666666
Phylopflank5.182935694999999
Longest consecutive pairings6
Position of longest consecutive pairings22
Pairings in 3prime end8
PositionCDS
2D Structure