Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTACATTGTGATAAGATTGGACCAGTGG
.(((((((((((((((((((((&)))))))))))))).......))..)))).).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_023073
GeneSymbolCPLANE1
Binding site8371,8403
Score0.846
Seed1
Au0.603
Energy-18.1
Binding len32
Me-3.793
Phylopstem1.321183025806452
Phylopflank2.349827915
Longest consecutive pairings14
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure