Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTACTGCCGATTCAGCTGTC
..(((((((((((.((.(((.&))))).))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_023073
GeneSymbolCPLANE1
Binding site8588,8609
Score0.923
Seed1
Au0.529
Energy-19.8
Binding len21
Me-5.814
Phylopstem0.5262771285714286
Phylopflank1.6404582349999999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure