Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAGCCCAGCTGCC
..(((((((.((((.(.((((&))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_023080
GeneSymbolC8orf33
Binding site1546,1564
Score0.923
Seed1
Au0.485
Energy-22.8
Binding len18
Me-6.935
Phylopstem0.2610853285714286
Phylopflank0.24437469875000004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure