Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTCTCCGGGGCTGCGAC
((((((((.(((....(((((&)))))....))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_023085
GeneSymbolCAPN10
Binding site114,136
Score0.846
Seed1
Au0.25
Energy-24.7
Binding len22
Me-8.108
Phylopstem-0.1475708
Phylopflank-0.08733626124999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure