Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGCCAGGG
.((((((((.............&)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_023112
GeneSymbolOTUB2
Binding site3414,3423
Score0.846
Seed1
Au0.544
Energy-15.1
Binding len9
Me-14.322
Phylopstem-0.156940375
Phylopflank0.17420335999999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure