Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTTCATCCCTCCCCACCATCCTGGGGAAGTGATGGTGTGGCCAGGC
.((((((.((((..........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_023935
GeneSymbolDDRGK1
Binding site1052,1100
Score0.846
Seed1
Au0.456
Energy-15.1
Binding len12
Me-9.221
Phylopstem1.7280283333333335
Phylopflank1.45565769875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure