Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGATTTCTCTTAATTCAGCTTGAATTGATGGGGAGGGAGGTAAGAGTAGGGTCA
.((((((((.(((((((..((&.))..)))))))....)))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_023938
GeneSymbolC1orf116
Binding site4500,4554
Score0.923
Seed1
Au0.559
Energy-27.7
Binding len25
Me-5.036
Phylopstem-0.45651054999999996
Phylopflank-0.18968012625000008
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure