Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGAGGCTTGCGCCAGAGCCTGAGAAAGAACAGGTCA
.((((.((((((((((((...&))))))))).)))....................)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_023938
GeneSymbolC1orf116
Binding site741,779
Score0.846
Seed0
Au0.353
Energy-23.4
Binding len38
Me-5.694
Phylopstem-0.05060649999999999
Phylopflank0.1343117375
Longest consecutive pairings9
Position of longest consecutive pairings29
Pairings in 3prime end5
PositionCDS
2D Structure