Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACAGCCCCAGACAGTGGCTGCGAC
((((((((((((((((..(((&))))))))).......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_023943
GeneSymbolTMEM108
Binding site950,977
Score0.923
Seed1
Au0.397
Energy-21.7
Binding len27
Me-3.938
Phylopstem0.9408267826086957
Phylopflank0.57538286375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure