Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGGCAGCCTCAGCA
.....((((.((((((..((.&))..)))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_023945
GeneSymbolMS4A5
Binding site16,32
Score0.846
Seed0
Au0.541
Energy-17.6
Binding len16
Me-14.908
Phylopstem0.38484321666666665
Phylopflank0.5769250987500001
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end5
Position5UTR
2D Structure