Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTATTGCCAAAACCCAGCTGCAC
.((((((((.(((((((((((&)))))))......)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024003
GeneSymbolL1CAM
Binding site4007,4033
Score0.846
Seed1
Au0.353
Energy-21.9
Binding len26
Me-5.036
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure