Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGACCACAGGCGTGGCTACTGCGGCTGGAGCTGCGAT
((((((((.((((((((.(((&.)))..)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024011
GeneSymbolCDK11A
Binding site2490,2531
Score0.923
Seed1
Au0.397
Energy-25.4
Binding len24
Me-4.994
Phylopstem2.93226015
Phylopflank3.36822207625
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure