Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCGAGGAGTGCCAGGTA
(((((((((.(..(((......&)))..).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024012
GeneSymbolHTR5A
Binding site1141,1158
Score0.923
Seed1
Au0.368
Energy-16.8
Binding len17
Me-9.816
Phylopstem4.752690666666667
Phylopflank4.573416782499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure