Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GAAGGCTGGAGGGTTTC
(((((((.((((((((.....&)))))))).))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_024012
GeneSymbolHTR5A
Binding site4104,4121
Score1.0
Seed1
Au0.485
Energy-26.8
Binding len17
Me-6.251
Phylopstem-0.08071700000000004
Phylopflank-0.31187236725
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end3
Position3UTR
2D Structure