Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGTGGTGCTCAGCTGCAAG
(((((((((.(((....(((.&)))......)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024013
GeneSymbolIFNA1
Binding site98,120
Score0.846
Seed1
Au0.456
Energy-19.2
Binding len22
Me-7.005
Phylopstem-0.2572499
Phylopflank-0.41617923749999997
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure