Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGCTAGAAAGTACAAGAAAAGGCAGCACGTGGTTTT
(((((((((.(((((((((((&))))))................))))).))).).))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_024017
GeneSymbolHOXB9
Binding site1541,1581
Score0.923
Seed1
Au0.529
Energy-23.3
Binding len40
Me-5.18
Phylopstem0.31652581888888887
Phylopflank0.49036692562499995
Longest consecutive pairings6
Position of longest consecutive pairings34
Pairings in 3prime end8
Position3UTR
2D Structure