Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTCACGCCGGGCGAAGGACCCGGCGCTGCGCTCGCAGCTGCGC
.(((((((((((.((((..((&.))..)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024019
GeneSymbolNEUROG2
Binding site228,274
Score0.846
Seed1
Au0.279
Energy-25.1
Binding len22
Me-5.082
Phylopstem3.099669818181818
Phylopflank3.197730575
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure