Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGAGCCAGGA
.((((((.((((..........&)))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024022
GeneSymbolTMPRSS3
Binding site12,24
Score0.923
Seed1
Au0.453
Energy-16.2
Binding len12
Me-9.221
Phylopstem-0.8548373066666667
Phylopflank-0.5627236163214285
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure