Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCTCCGTGGAGGTGATGGCCGTGGCTGCC
..((((((((((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024028
GeneSymbolPCYOX1L
Binding site1379,1412
Score0.923
Seed1
Au0.353
Energy-22.4
Binding len16
Me-4.957
Phylopstem5.697294142857143
Phylopflank3.9220376925
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure