Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCCGCGGTTCTGGCGT
.(((((((((((((((.....&))))))))))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024037
GeneSymbolAUNIP
Binding site23,42
Score0.846
Seed1
Au0.221
Energy-19.9
Binding len19
Me-3.793
Phylopstem0.8300935611111111
Phylopflank0.31967995528846155
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end3
Position5UTR
2D Structure