Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACCAATGTGGCTGCC
..((((((((((((((.....&))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024045
GeneSymbolDDX50
Binding site1399,1417
Score0.808
Seed1
Au0.529
Energy-20.0
Binding len18
Me-4.957
Phylopstem5.552470588235294
Phylopflank5.049750000000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure