Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTACGCTGCTGTTGA
...((((.((((.(((((((.&))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024045
GeneSymbolDDX50
Binding site1681,1698
Score0.923
Seed0
Au0.515
Energy-17.1
Binding len17
Me-10.117
Phylopstem2.4514162857142856
Phylopflank4.12582357
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure