Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACCCCCGGGGCTGCAGGTGGGGCCACAGCTGCAGCTGCGAG
((((((((((((((((..(((&.))))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024046
GeneSymbolCAMKV
Binding site1198,1242
Score0.923
Seed1
Au0.294
Energy-30.8
Binding len21
Me-3.938
Phylopstem1.144199925
Phylopflank1.2434329212500002
Longest consecutive pairings19
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure