Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGACTCGGAGCTGTGGG
((((((((.(((((....(((&)))..))).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024047
GeneSymbolNUDT9
Binding site247,268
Score0.846
Seed1
Au0.324
Energy-18.8
Binding len21
Me-5.962
Phylopstem0.15518037199999998
Phylopflank-0.07895103839999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure