Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCTCCCCAGCCATCAACGGCCGCAGCC
.....(((((((((((..(((&.)))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024069
GeneSymbolKXD1
Binding site533,565
Score1.0
Seed0
Au0.368
Energy-21.9
Binding len20
Me-13.666
Phylopstem2.208275545454545
Phylopflank2.2805656232250007
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure