Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGAGCAGCAGGCAGCTGG
...(((((((.((((((((((&)))))...)))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024072
GeneSymbolDDX54
Binding site2133,2156
Score0.846
Seed0
Au0.353
Energy-23.2
Binding len23
Me-9.339
Phylopstem4.690197615384616
Phylopflank2.8631085725
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure