Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACTTTGAGCAGCTGCT
..(((((((((((((......&)))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024074
GeneSymbolTMEM38A
Binding site567,585
Score1.0
Seed1
Au0.412
Energy-19.5
Binding len18
Me-5.19
Phylopstem5.101480647058825
Phylopflank5.060114475000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure