Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCTGAGTAGCTGCAT
.((((((((((((((..((((&)))))))))......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024081
GeneSymbolPRRG4
Binding site4686,4711
Score0.808
Seed1
Au0.441
Energy-23.1
Binding len25
Me-4.026
Phylopstem-0.24758270000000002
Phylopflank-0.025046937500000012
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end6
Position3UTR
2D Structure