Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCACCCCACCCAAGCAGCTGCC
..(((((((((((.((..(((&)))..))...)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024081
GeneSymbolPRRG4
Binding site3674,3699
Score0.846
Seed1
Au0.5
Energy-19.9
Binding len25
Me-5.814
Phylopstem-0.10820871428571428
Phylopflank0.2006777375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure