Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCACTGCATGCTGGGA
.((((((((.((.(((((....&))))).)).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024085
GeneSymbolATG9A
Binding site3555,3573
Score0.846
Seed1
Au0.353
Energy-18.6
Binding len18
Me-6.325
Phylopstem3.4526225
Phylopflank2.69672332625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure