Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTTTAATGCTTGTGTCAGCGGCAGCTGGGAT
((.(((((((.((((..((((&.))))....)))).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024087
GeneSymbolASB9
Binding site523,557
Score0.846
Seed0
Au0.485
Energy-23.1
Binding len25
Me-8.553
Phylopstem2.493464571428571
Phylopflank0.723816812375
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure