Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTTACAAAAGCCCTAGAGCATCGTGTAGCTGCGGT
((((((((((((((.((.(((&.))).)).)))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024091
GeneSymbolFASTKD3
Binding site1215,1251
Score0.923
Seed1
Au0.529
Energy-21.3
Binding len27
Me-4.673
Phylopstem2.7496772722222222
Phylopflank1.7383766399999998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure