Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAACGGCTGCAAG
((((((((...((((.((((.&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024091
GeneSymbolFASTKD3
Binding site1587,1604
Score0.846
Seed1
Au0.618
Energy-19.3
Binding len17
Me-9.294
Phylopstem1.7353069125
Phylopflank1.1142192887500002
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure