Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCGGCCGAGCTGCT
..((((((.((((((((....&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024094
GeneSymbolDSCC1
Binding site152,167
Score0.923
Seed1
Au0.294
Energy-22.7
Binding len15
Me-6.013
Phylopstem-0.023823805000000003
Phylopflank0.06832305899999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure