Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTATTGCCAGGC
.(((((((((((..........&))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024097
GeneSymbolC1orf50
Binding site2399,2412
Score0.923
Seed1
Au0.544
Energy-16.5
Binding len13
Me-6.908
Phylopstem-0.1322836666666667
Phylopflank0.07588263324999997
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure