Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGCTGAGCCATGGATACACCGTTAAGGCGCAGCCGACGGCTGGGAG
((.(((((((((((((.....&.))))))).)))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024098
GeneSymbolCCDC86
Binding site1,49
Score0.808
Seed0
Au0.338
Energy-23.3
Binding len19
Me-5.495
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end3
Position5UTR
2D Structure