Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTAGCGGCCGGGGCTGCGGT
((((((((.(((((((..(((&)))...))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024105
GeneSymbolALG12
Binding site31,54
Score0.846
Seed1
Au0.397
Energy-28.1
Binding len23
Me-4.994
Phylopstem0.12014962500000001
Phylopflank-0.16166561250000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure