Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGGTGTCAGAGGAGGCAAAGGGGTCC
.((((((...(((((((((((&))))))..........)))))...)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_024108
GeneSymbolTRAPPC6A
Binding site684,715
Score0.846
Seed1
Au0.397
Energy-27.4
Binding len31
Me-8.406
Phylopstem1.7420202571428574
Phylopflank0.5642399069999998
Longest consecutive pairings6
Position of longest consecutive pairings25
Pairings in 3prime end8
Position3UTR
2D Structure