Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCTGAGCCGCACTGCTGCC
..((((((((((((...((((&))))....)))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024108
GeneSymbolTRAPPC6A
Binding site552,575
Score0.846
Seed1
Au0.294
Energy-23.7
Binding len23
Me-5.925
Phylopstem0.6368501
Phylopflank1.4667390200000003
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure