Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCACAAGACAGACTTGCGACCGCTTGAGCCCACTGAGCAGATATGGTGGGTGGCTGGAGG
((.((((((((((((((((..&.)))))))))))............................))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024111
GeneSymbolCHAC1
Binding site842,902
Score0.846
Seed0
Au0.412
Energy-23.5
Binding len49
Me-5.495
Phylopstem-0.049773818181818204
Phylopflank-0.05501313124999997
Longest consecutive pairings11
Position of longest consecutive pairings37
Pairings in 3prime end6
Position3UTR
2D Structure