Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCTGCCAGCCTGCAGCTCTCCTGCT
..(((((((((((((..((((&))))......))))).)))))).....)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024111
GeneSymbolCHAC1
Binding site921,951
Score0.846
Seed1
Au0.5
Energy-19.2
Binding len30
Me-5.19
Phylopstem-0.009873263157894718
Phylopflank0.8738361562500001
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure