Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGTCACCCAGGCTGTAGTGCAATGGCCGCAGTCTTGGCTTACTGCAAC
((((((((((((((((.....&.))))))))))..........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024116
GeneSymbolTAF1D
Binding site1544,1595
Score0.846
Seed1
Au0.426
Energy-19.5
Binding len28
Me-3.938
Phylopstem-0.903427338461538
Phylopflank-0.8809936137500004
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end3
Position3UTR
2D Structure