Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAGCTGCACCCCTGCTGCTGCGAG
(((((((((((((((..((((&)))).))))))))........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024121
GeneSymbolTMEM185B
Binding site5099,5128
Score0.846
Seed1
Au0.426
Energy-23.3
Binding len29
Me-4.171
Phylopstem5.411059230434781
Phylopflank4.584163981250001
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end6
Position3UTR
2D Structure