Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGTCAGCTGCCTGCGAG
((((((..(((((((...(((&)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024295
GeneSymbolDERL1
Binding site2710,2730
Score0.923
Seed0
Au0.529
Energy-19.4
Binding len20
Me-8.028
Phylopstem6.117494285714286
Phylopflank5.129914771499999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure