Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAGCCCGGCTGCAC
.((((((((.(((((......&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024296
GeneSymbolCCDC28B
Binding site523,537
Score0.923
Seed1
Au0.382
Energy-19.7
Binding len14
Me-5.269
Phylopstem3.11140875
Phylopflank4.372354400000001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure